Commit Graph

559 Commits

Author SHA1 Message Date
D. Berge
086172c5e7 Upgrade dependencies.
This is a conservative upgrade.

The upgraded version of leaflet-arrowheads uses optional chaining which
seems to cause webpack to choke, so added to "transpileDependencies" in
vue.config.js.

Closes #189.
2022-03-18 16:29:50 +01:00
D. Berge
3db453a271 Add keys to v-for loops 2022-03-18 16:15:06 +01:00
D. Berge
a5db9c984b Show sequence comments in log page 2022-03-18 15:05:08 +01:00
D. Berge
634a7be3f1 Merge branch '184-refactor-qcs' into devel 2022-03-17 20:12:15 +01:00
D. Berge
913606e7f1 Allow forcing QCs.
QCs may be re-run for specific sequences or for a whole
project by defining an environment variable, as follows:

For an entire project:

* DOUGAL_FORCE_QC="project-id"

For specific sequences:

* DOUGAL_FORCE_QC="project-id sequence1 sequence2 … sequenceN"
2022-03-17 20:10:26 +01:00
D. Berge
49b7747ded Remove *all* QC events when saving sequence results.
When saving shot-by-shot results for a sequence,
*all* existing QC events for that sequence will be
removed first.

We do this because otherwise we may end up with QC
data for shots that no longer exist. Also, in the
case that we have QCed based on raw data, QC results
for shots which are not in the final data would stay
around even though those shots are no longer valid.
2022-03-17 20:07:11 +01:00
D. Berge
1fd265cc74 Update dependencies 2022-03-17 20:05:07 +01:00
D. Berge
13389706a9 Merge branch '184-refactor-qcs' into devel 2022-03-17 18:43:38 +01:00
D. Berge
818cd8b070 Add pg-cursor dependency, needed by QCs 2022-03-17 18:43:12 +01:00
D. Berge
a3d3c7aea7 Merge branch '184-refactor-qcs' into devel 2022-03-17 18:37:14 +01:00
D. Berge
a592ab5f6c Use digests rather than timestamps for QC execution.
Using timestamps does not work as we might be
importing files with timestamps older than the
last QC run. Those would not be detected by a
timestamp based method but would be by this
digest based approach.

There is a project-wide digest and per sequence
digests. The former takes the path and hashes of
all files known to Dougal for this project (the
`files` table), concatenantes them and computes
the MD5 checksum. Sequence digests do the same
but only including the files related to that
sequence.
2022-03-17 18:32:09 +01:00
D. Berge
2484b1c473 Merge branch '188-adapt-qc-results-view-to-new-api-endpoints' into 138-keep-edit-history-of-event-log-entries 2022-03-09 21:37:27 +01:00
D. Berge
750beb5c02 Add explicit indication of all tests passed 2022-03-09 21:36:49 +01:00
D. Berge
2ec484da41 Fix detection of sequence modification time 2022-03-09 21:25:04 +01:00
D. Berge
bef2be10d2 Merge branch '188-adapt-qc-results-view-to-new-api-endpoints' into '184-refactor-qcs'
Resolve "Adapt QC results view to new API endpoints"

See merge request wgp/dougal/software!24
2022-03-09 16:56:35 +00:00
D. Berge
c86cbdc493 Refactor QC view to use new API endpoint.
This provides essentially the same user experience as the old
endpoint, with one exception as of this commit:

* The user is not able to “accept” or “unaccept” QC events.
2022-03-09 17:50:55 +01:00
D. Berge
186615d988 Add comments for ease of browsing 2022-03-09 17:43:51 +01:00
D. Berge
666f91de18 Add QC results API endpoint 2022-03-09 17:43:10 +01:00
D. Berge
c8ce786e39 Add API middleware for returning QC results 2022-03-09 17:41:27 +01:00
D. Berge
73cb26551b Add library functions for getting QC results from DB.
We return the QC definitions tree structure, augmented with
a `sequences` attribute which contains `raw_lines` tuples
which are in turn augmented with a `shots` attribute
containing `event_log` tuples. The whole structure looks
something like:

qc_test:
  qc_test:
    sequences:
      - sequence0:
          shots: [sp0, sp1, …]
      - sequence1:
          shots: [sp0, sp1, …]
  qc_test:
    sequences:
      - sequence0:
          shots: [sp0, sp1, …]
  …
2022-03-09 17:35:12 +01:00
D. Berge
d90acb1aeb Add utility to convert QC definitions tree into a flat list 2022-03-09 17:32:23 +01:00
D. Berge
14a2f57c8d Refactor QC execution and results saving.
The results are now saved as follows:

For shot QCs, failing tests result in an event being created in
the event_log table. The text of the event is the QC result message,
while the labels are as set in the QC definition. It is conventionally
expected that these include a `QC` label. The event `meta` contains a
`qc_id` attribute with the ID of the failing QC.

For sequences, failing tests result in a `meta` entry under `qc`, with
the QC ID as the key and the result message as the value.

Finally, the project's `info` table still has a `qc` key, but unlike
with the old code, which stored all the QC results in a huge object
under this key, now only the timestamp of the last time a QC was run on
this project is stored, as `{ "updatedOn": timestamp }`.

The QCs are launched by calling the main() function in /lib/qc/index.js.
This function will first check the timestamp of the files imported into
the project and only run QCs if any of the file timestamps are later
than `info.qc.updatedOn`. Likewise, for each sequence, the timestamp of
the files conforming that sequence is checked against
`info.qc.updatedOn` and only those which are newer are actually
processed. This cuts down the running time very considerably.

The logic now is much easier on memory too, as it doesn't load the
whole project at once into memory. Instead, shotpoint QCs are processed
first, and for this a cursor is used, fetching one shotpoint at a
time. Then the sequence QCs are run, also one sequence at a time
(fetched via an individual query touching the `sequences_summary` view,
rather than via a cursor; we reuse some of the lib/db functions here),
for each sequence all its shotpoints and a list of missing shots are
also fetched (via lib/db function reuse) and passed to the QC functions
as predefined variables.

The logic of the QC functions is also changed. Now they can return:

* If a QC passes, the function MUST return boolean `true`.

* If a QC fails, the function MAY return a string describing the nature
  of the failure, or in the case of an `iterate: sequence` type test,
  it may return an object with these attributes:

  - `remarks`: a string describing the nature of the failure;
  - `labels`: a set of labels to associate with this failure;
  - `shots`: a object in which each attribute denotes a shotpoint number
    and the value consists of either a string or an object with
`remarks` (string), `labels` (array of strings) attributes. This allows
us to add detail about which shotpoints exactly contribute to cause a
sequence-wide test failure (this may not be applicable to every
sequence-wide QC) and it's also a handy way to detect and insert events
for missing shots.

* For QCs which may give false positives, such as missing gun data, a
  new QC definition attribute is introduced: if `ignoreAllFailed` is
boolean `true` and all shots fail the test for a sequence, or all
sequences fail the test for a prospect, the results of the QC will be
ignored, as if the test had passed. This is mostly to deal with gun or
any other data that may be temporarily missing.
2022-03-07 21:41:10 +01:00
D. Berge
67f8b9c6dd Bypass permissions check on info.put() if role is null.
The comparison is strict non-equality so a null role cannot
be forced via the API.

The need for this is so that we can reuse this function to
save QC results, which is something that does not take
place over the API.
2022-03-07 21:20:21 +01:00
D. Berge
d3336c6cf7 Add fetchRow DB function.
Helper function to fetch a row at a time using a cursor.
2022-03-07 21:16:43 +01:00
D. Berge
8debe60d5c Cope with undefined labels 2022-03-02 19:39:29 +01:00
D. Berge
cb952d37f7 Fix: do not require file that no longer exists 2022-02-28 21:25:00 +01:00
D. Berge
d5fc04795d Make rows dense.
This should probably be turned into an option controlled by the
user.
2022-02-27 19:59:06 +01:00
D. Berge
4e0737335f Add row context menu.
It replaces the `Actions` column in the old table and provides
more actions.

The user can now edit not just the comments and labels but also
the timestamp / shotpoint as requested in #78 (closes #78).

Because events are grouped by timestamp / shotpoint (each row
represents a unique timestamp or shotpoint), the behaviour is
slightly different depending on whether the user clicks on a
row containing a single (editable) event, or on one of multiple
editable events in the same row. Also, rows containing only
read-only events are recognised and no edition actions are
provided for those.
2022-02-27 19:59:06 +01:00
D. Berge
d47c8a9e10 Add (disabled) active row highlighter.
It implements the same functionality as in other tabs
such as sequences, lines, etc., but it is disabled here
because in my opinion it doesn't look too nice.

It will probably be a matter of enabling it at some point
and asking for feedback on user preference.
2022-02-27 19:56:21 +01:00
D. Berge
7ea0105d9f Add popularLabels computed property.
Returns a list of labels used in the current view,
in order of popularity (most used first).

NOTE: this property is not actually used. It's
technically dead code.
2022-02-27 19:56:21 +01:00
D. Berge
8f4bda011b Add dialogue to edit event labels.
This assumes that adding or removing labels is a relatively
common action to do on an event and provides a quicker
and simpler mechanism than bringing up the full event
dialogue.

This is meant to be invoked from a context menu action or
similar.
2022-02-27 19:56:21 +01:00
D. Berge
48505dbaeb View event history.
When an event has been modified, this control opens a dialogue
where the previous version of the event may be reviewed and if
necessary restored.

Technically, this was the quid of and closes #138.
2022-02-27 19:56:21 +01:00
D. Berge
278c46f975 Adapt events view to new schema 2022-02-27 19:56:21 +01:00
D. Berge
180343754a Remove old event edit dialogue 2022-02-27 19:56:21 +01:00
D. Berge
9aa9ce979b Replace event edit dialogue.
The old <dougal-event-edit-dialog/> gets replaced by
<dougal-event-edit/> which handles the new events schema.
2022-02-27 19:56:21 +01:00
D. Berge
1e5be9c655 Add new event edit dialogue.
Replaces <dougal-event-edit-dialog/>.
2022-02-27 19:56:21 +01:00
D. Berge
0be5dba2b9 Return also labels from <dougal-context-menu/>.
Keeping in mind that the input model is a tree and labels
may be at any level in the tree, not just in the leaves.
2022-02-27 19:56:21 +01:00
D. Berge
0c91e40817 Fix <dougal-context-menu/> default prop value 2022-02-27 19:56:21 +01:00
D. Berge
c1440c7ac8 Simplifiy <dougal-context-menu/> model 2022-02-27 19:56:21 +01:00
D. Berge
606f18c016 Add Vuex position and timestamp getters for real-time event 2022-02-27 19:56:21 +01:00
D. Berge
febf109cce Update API description 2022-02-27 19:56:21 +01:00
D. Berge
9b700ffb46 Update required database schema 2022-02-27 19:56:21 +01:00
D. Berge
9aca927e49 Update version checking mechanism.
Checks both database schema and API versions.
2022-02-27 19:56:21 +01:00
D. Berge
adaa1a6b8a Add version number to API 2022-02-27 19:56:21 +01:00
D. Berge
8790a797d9 Allow restricting by timestamp or position.
Closes #181.
2022-02-27 19:56:21 +01:00
D. Berge
d7d75f34cd Remove event caching.
That was a horrible kludge and should not be necessary with the
new schema, which is simpler and much faster.
2022-02-27 19:56:21 +01:00
D. Berge
950582a5c6 Refactor event middleware and db code to use new tables 2022-02-27 19:56:21 +01:00
D. Berge
d0da1b005b Add replaceMarkers utility function 2022-02-27 19:56:21 +01:00
D. Berge
4d2efd1e04 Move sequence events middleware to a different path.
This is to make room for a new endpoint to retrieve
data for individual events.
2022-02-27 19:56:21 +01:00
D. Berge
920ea83ece Add API endpoint to retrieve a single shotpoint.
This will be used by the new event dialogue in the
frontend to get shotpoint information when creating
or editing events.
2022-02-27 19:56:21 +01:00